Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC7.24□□□□□ -1.25
Col1a1P11087 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm23224-201ENSMUST00000158122 271 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Mir6337-201ENSMUST00000184194 105 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm27887-201ENSMUST00000184367 102 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm28640-201ENSMUST00000190918 550 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm38384-201ENSMUST00000195413 1122 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm31211-201ENSMUST00000199170 253 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm45196-201ENSMUST00000206751 825 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC7.24□□□□□ -1.25
Col1a1P11087 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC7.24□□□□□ -1.25
Col1a1P11087 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Col1a1P11087 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Col1a1P11087 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col1a1P11087 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col1a1P11087 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Col1a1P11087 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Col1a1P11087 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.23□□□□□ -1.25
Col1a1P11087 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.23□□□□□ -1.25
Col1a1P11087 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Col1a1P11087 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Col1a1P11087 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC7.23□□□□□ -1.25
Col1a1P11087 Gm13870-201ENSMUST00000117214 1023 ntBASIC7.23□□□□□ -1.25
Col1a1P11087 Gm11737-201ENSMUST00000118713 468 ntBASIC7.23□□□□□ -1.25
Col1a1P11087 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC7.23□□□□□ -1.25
Col1a1P11087 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Col1a1P11087 Gm18444-201ENSMUST00000191239 629 ntBASIC7.23□□□□□ -1.25
Col1a1P11087 Gm43148-201ENSMUST00000198237 520 ntBASIC7.23□□□□□ -1.25
Col1a1P11087 Gm42961-201ENSMUST00000202023 181 ntBASIC7.23□□□□□ -1.25
Col1a1P11087 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.23□□□□□ -1.25
Col1a1P11087 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC7.23□□□□□ -1.25
Col1a1P11087 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col1a1P11087 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Col1a1P11087 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col1a1P11087 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col1a1P11087 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
Col1a1P11087 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col1a1P11087 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Col1a1P11087 Gm42873-201ENSMUST00000196110 1726 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Col1a1P11087 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 Gm13193-201ENSMUST00000117275 225 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Gm14836-201ENSMUST00000118567 471 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Gm6744-201ENSMUST00000119303 543 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Gm4911-201ENSMUST00000119388 945 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Gm12308-201ENSMUST00000120440 389 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Gm13531-201ENSMUST00000121893 543 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Gm24767-201ENSMUST00000158509 95 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Gm25489-201ENSMUST00000158727 141 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col1a1P11087 Gm8826-201ENSMUST00000193161 948 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Gm5318-201ENSMUST00000205249 406 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Gm19900-201ENSMUST00000207285 576 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC7.22□□□□□ -1.25
Col1a1P11087 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Col1a1P11087 Gm6068-201ENSMUST00000222270 387 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 AC156802.1-201ENSMUST00000223623 579 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 CU062626.1-201ENSMUST00000225248 505 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col1a1P11087 Gm24200-201ENSMUST00000082955 157 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Col1a1P11087 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Col1a1P11087 Thap6-201ENSMUST00000191860 3151 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.22□□□□□ -1.25
Col1a1P11087 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col1a1P11087 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Col1a1P11087 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms