Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm29496-201ENSMUST00000189854 693 ntBASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Gm10126-201ENSMUST00000221732 168 ntBASIC6.55□□□□□ -1.36
Trim8Q99PJ2 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.55□□□□□ -1.36
Trim8Q99PJ2 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Gm6166-201ENSMUST00000098689 409 ntBASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Gm42736-201ENSMUST00000200723 1353 ntBASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim8Q99PJ2 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm13311-201ENSMUST00000117863 379 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm12757-201ENSMUST00000119465 800 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm15153-201ENSMUST00000119867 274 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm7651-201ENSMUST00000173398 901 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm26528-201ENSMUST00000181965 283 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 V1rg10-201ENSMUST00000183378 937 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Mir6337-201ENSMUST00000184194 105 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm29492-201ENSMUST00000187124 457 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm44590-201ENSMUST00000206161 391 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm24405-201ENSMUST00000083033 167 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim8Q99PJ2 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms