Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb3Q91XZ7 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Pcdhb3Q91XZ7 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb3Q91XZ7 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb3Q91XZ7 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb3Q91XZ7 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Pcdhb3Q91XZ7 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb3Q91XZ7 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Pcdhb3Q91XZ7 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
Pcdhb3Q91XZ7 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb3Q91XZ7 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm38315-201ENSMUST00000194286 2437 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Rpl23a-ps3-201ENSMUST00000104925 468 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm13879-201ENSMUST00000118308 242 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm15355-201ENSMUST00000118929 285 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm14824-201ENSMUST00000119421 737 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm14785-201ENSMUST00000120185 539 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm7700-201ENSMUST00000120273 970 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm12007-201ENSMUST00000120978 597 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm6031-201ENSMUST00000121314 1054 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm13360-201ENSMUST00000121607 799 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm14143-201ENSMUST00000121686 357 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm13368-201ENSMUST00000122443 430 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm25909-201ENSMUST00000157619 121 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm24853-201ENSMUST00000158026 121 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm23220-201ENSMUST00000158115 137 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Btnl5-ps-202ENSMUST00000173333 461 ntTSL 2 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm6723-201ENSMUST00000180449 441 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm7577-201ENSMUST00000182543 982 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm28478-201ENSMUST00000185802 183 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm7890-201ENSMUST00000204877 601 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm44971-201ENSMUST00000206192 337 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm44833-201ENSMUST00000208368 331 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm7839-201ENSMUST00000210755 673 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 CT030704.1-201ENSMUST00000227521 699 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 AC142114.1-201ENSMUST00000227724 328 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm10335-201ENSMUST00000096020 468 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm10132-201ENSMUST00000099431 468 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm43413-201ENSMUST00000200411 1566 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Asic5-202ENSMUST00000107736 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Pcdhb3Q91XZ7 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Gm45292-201ENSMUST00000211232 2207 ntBASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Zfp939-201ENSMUST00000061201 2131 ntBASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Nmnat1-202ENSMUST00000105693 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Gm25608-201ENSMUST00000104021 132 ntBASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Gm14188-201ENSMUST00000105060 168 ntBASIC7.9□□□□□ -1.14
Pcdhb3Q91XZ7 Gm12206-201ENSMUST00000119795 601 ntBASIC7.9□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms