Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 CT025630.2-201ENSMUST00000228293 487 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 AC107645.1-201ENSMUST00000228660 1810 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm37356-201ENSMUST00000193362 1613 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm6125-201ENSMUST00000217983 3472 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm37400-201ENSMUST00000193148 3605 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm42702-201ENSMUST00000199515 4217 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm24284-201ENSMUST00000104240 142 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm12040-201ENSMUST00000118357 537 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm14870-201ENSMUST00000118414 156 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm14769-201ENSMUST00000118590 432 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm5844-201ENSMUST00000119417 2191 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm8916-201ENSMUST00000119732 949 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm28006-201ENSMUST00000183841 122 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm27401-201ENSMUST00000184052 173 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm43048-201ENSMUST00000196101 388 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm32158-201ENSMUST00000200135 404 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm18960-201ENSMUST00000222962 713 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 AC153532.2-201ENSMUST00000219753 3844 ntBASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc9Q8VC31 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 AC154368.2-201ENSMUST00000222334 1724 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm14279-201ENSMUST00000117142 332 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm10243-201ENSMUST00000117571 333 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm11926-201ENSMUST00000118520 430 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm12331-201ENSMUST00000119927 622 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm11257-201ENSMUST00000121313 315 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm23069-201ENSMUST00000158240 311 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm23115-201ENSMUST00000158480 108 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm16026-205ENSMUST00000162923 641 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm18848-201ENSMUST00000182069 792 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Pea15b-201ENSMUST00000182806 387 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Mir378d-201ENSMUST00000184232 110 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm43387-201ENSMUST00000196896 1066 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm24826-202ENSMUST00000197298 216 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm20940-201ENSMUST00000197308 360 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm3511-201ENSMUST00000199823 204 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm35638-201ENSMUST00000220724 652 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 AC155266.1-201ENSMUST00000220762 904 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms