Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Col6a6Q8C6K9 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Col6a6Q8C6K9 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Col6a6Q8C6K9 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC5.59□□□□□ -1.52
Col6a6Q8C6K9 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a6Q8C6K9 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm12077-201ENSMUST00000117049 364 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm29159-201ENSMUST00000187969 379 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm3841-201ENSMUST00000191399 451 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm20926-201ENSMUST00000194457 696 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm19900-201ENSMUST00000207285 576 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm30694-201ENSMUST00000209278 1230 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Gm5514-201ENSMUST00000060477 306 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Mir188-201ENSMUST00000083464 68 ntBASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Col6a6Q8C6K9 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 CT025642.2-201ENSMUST00000225009 1649 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm11737-201ENSMUST00000118713 468 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm2199-201ENSMUST00000119065 874 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm5080-201ENSMUST00000220341 743 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm9877-201ENSMUST00000064271 2627 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms