Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm17919-201ENSMUST00000173344 312 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm23139-201ENSMUST00000179454 132 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm37111-201ENSMUST00000193250 634 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm45042-201ENSMUST00000207377 211 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 AC091260.1-201ENSMUST00000216112 229 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 AC166323.1-201ENSMUST00000217756 367 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 AC124399.1-201ENSMUST00000218334 590 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 AC122301.1-201ENSMUST00000219625 507 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 CT030182.4-201ENSMUST00000223647 645 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 AC154795.1-201ENSMUST00000225611 364 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Olfr480-201ENSMUST00000071658 1029 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Mir190b-201ENSMUST00000104803 80 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm13768-201ENSMUST00000116469 929 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm14869-201ENSMUST00000119007 884 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Defa-ps1-201ENSMUST00000119062 282 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm12578-201ENSMUST00000121244 417 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Defa-ps6-201ENSMUST00000122172 282 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm23212-201ENSMUST00000122718 60 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm3339-201ENSMUST00000163462 475 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm5283-201ENSMUST00000177874 334 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm27599-201ENSMUST00000183758 174 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm29357-201ENSMUST00000186877 698 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm19694-201ENSMUST00000192364 505 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm8125-201ENSMUST00000216602 738 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 AC153881.3-201ENSMUST00000218494 1561 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 AC154436.2-201ENSMUST00000227408 208 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm5446-201ENSMUST00000091762 784 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms