Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Col17a1Q07563 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC9.64□□□□□ -0.87
Col17a1Q07563 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC9.64□□□□□ -0.87
Col17a1Q07563 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 AC134860.3-201ENSMUST00000223564 1300 ntBASIC9.64□□□□□ -0.87
Col17a1Q07563 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 Gm24544-201ENSMUST00000103862 110 ntBASIC9.64□□□□□ -0.87
Col17a1Q07563 Gm12988-201ENSMUST00000119054 478 ntBASIC9.64□□□□□ -0.87
Col17a1Q07563 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Col17a1Q07563 Gm9671-201ENSMUST00000171502 547 ntBASIC9.64□□□□□ -0.87
Col17a1Q07563 Gm37002-201ENSMUST00000194560 373 ntBASIC9.64□□□□□ -0.87
Col17a1Q07563 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC9.64□□□□□ -0.87
Col17a1Q07563 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 Gm4263-201ENSMUST00000220693 1101 ntBASIC9.64□□□□□ -0.87
Col17a1Q07563 Gm18442-201ENSMUST00000220925 639 ntBASIC9.64□□□□□ -0.87
Col17a1Q07563 AC121599.1-201ENSMUST00000224276 449 ntBASIC9.64□□□□□ -0.87
Col17a1Q07563 Gm23737-201ENSMUST00000082547 159 ntBASIC9.64□□□□□ -0.87
Col17a1Q07563 Gm7731-201ENSMUST00000091759 470 ntBASIC9.64□□□□□ -0.87
Col17a1Q07563 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Col17a1Q07563 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Col17a1Q07563 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Col17a1Q07563 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col17a1Q07563 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC9.64□□□□□ -0.87
Col17a1Q07563 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Col17a1Q07563 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Gm37940-201ENSMUST00000194243 3251 ntBASIC9.63□□□□□ -0.87
Col17a1Q07563 Gm42577-201ENSMUST00000201367 3211 ntBASIC9.63□□□□□ -0.87
Col17a1Q07563 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Col17a1Q07563 Ear-ps2-201ENSMUST00000100689 466 ntBASIC9.63□□□□□ -0.87
Col17a1Q07563 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC9.63□□□□□ -0.87
Col17a1Q07563 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Gm23740-201ENSMUST00000157385 100 ntBASIC9.63□□□□□ -0.87
Col17a1Q07563 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Gm27004-201ENSMUST00000183300 727 ntBASIC9.63□□□□□ -0.87
Col17a1Q07563 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Col17a1Q07563 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC9.63□□□□□ -0.87
Col17a1Q07563 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC9.63□□□□□ -0.87
Col17a1Q07563 Gm9231-201ENSMUST00000220817 1009 ntBASIC9.63□□□□□ -0.87
Col17a1Q07563 AC125539.1-202ENSMUST00000226449 670 ntBASIC9.63□□□□□ -0.87
Col17a1Q07563 Gm28392-201ENSMUST00000077630 393 ntBASIC9.63□□□□□ -0.87
Col17a1Q07563 Gm43490-201ENSMUST00000197593 2652 ntBASIC9.63□□□□□ -0.87
Col17a1Q07563 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Col17a1Q07563 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Col17a1Q07563 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Col17a1Q07563 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Col17a1Q07563 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Col17a1Q07563 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm10764-202ENSMUST00000220397 2335 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Col17a1Q07563 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Col17a1Q07563 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC9.62□□□□□ -0.87
Col17a1Q07563 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Col17a1Q07563 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm14745-201ENSMUST00000118480 1096 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC9.62□□□□□ -0.87
Col17a1Q07563 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21816-201ENSMUST00000179255 360 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28604-201ENSMUST00000186629 484 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28566-201ENSMUST00000186714 484 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28194-201ENSMUST00000187412 484 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms