Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm28665-201ENSMUST00000189269 670 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Gm20871-201ENSMUST00000191322 931 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Trbv9-201ENSMUST00000194494 290 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Gm34015-201ENSMUST00000194908 451 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Gm30638-201ENSMUST00000195570 656 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Gm36728-201ENSMUST00000195782 665 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Mir7116-201ENSMUST00000195956 70 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Gm42431-201ENSMUST00000196880 323 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.7□□□□□ -1.34
Msx2Q03358 Gm18378-201ENSMUST00000216245 628 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.7□□□□□ -1.34
Msx2Q03358 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Msx2Q03358 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Msx2Q03358 Gm4953-201ENSMUST00000077309 483 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Msx2Q03358 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Msx2Q03358 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Msx2Q03358 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.7□□□□□ -1.34
Msx2Q03358 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.7□□□□□ -1.34
Msx2Q03358 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Msx2Q03358 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Msx2Q03358 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msx2Q03358 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msx2Q03358 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msx2Q03358 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Msx2Q03358 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msx2Q03358 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Msx2Q03358 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.7□□□□□ -1.34
Msx2Q03358 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.69□□□□□ -1.34
Msx2Q03358 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Msx2Q03358 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Mir546-201ENSMUST00000102105 121 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm25608-201ENSMUST00000104021 132 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC6.69□□□□□ -1.34
Msx2Q03358 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm25839-201ENSMUST00000158921 103 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm16026-205ENSMUST00000162923 641 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm23145-201ENSMUST00000178912 79 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm29413-201ENSMUST00000186019 880 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm20813-201ENSMUST00000186646 705 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm28859-201ENSMUST00000186650 616 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm18033-201ENSMUST00000186678 550 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm21617-201ENSMUST00000188297 691 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm4545-201ENSMUST00000190797 603 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm37383-201ENSMUST00000191750 745 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm17953-201ENSMUST00000192061 667 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm42625-201ENSMUST00000198611 922 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC6.69□□□□□ -1.34
Msx2Q03358 Gm43226-201ENSMUST00000202438 259 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm19032-201ENSMUST00000208584 592 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm8168-201ENSMUST00000209631 948 ntBASIC6.69□□□□□ -1.34
Msx2Q03358 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms