Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm43238-201ENSMUST00000196463 359 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Igkv12-49-201ENSMUST00000197714 278 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm43848-201ENSMUST00000198060 1247 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm43794-201ENSMUST00000200971 692 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm2602-201ENSMUST00000202112 571 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm44432-201ENSMUST00000203342 938 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm9367-201ENSMUST00000205703 546 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm19201-201ENSMUST00000210127 778 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm3912-203ENSMUST00000211024 367 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 AL772265.1-201ENSMUST00000214379 305 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 AC122393.1-201ENSMUST00000226570 319 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Gm24623-201ENSMUST00000082616 194 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 CT010514.1-201ENSMUST00000214088 2969 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.04□□□□□ -1.44
Col8a1Q00780 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col8a1Q00780 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col8a1Q00780 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm15916-201ENSMUST00000118355 736 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Defa-ps13-201ENSMUST00000120695 204 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm23467-201ENSMUST00000157127 159 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm25432-201ENSMUST00000158284 66 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm7281-201ENSMUST00000160010 543 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm17137-202ENSMUST00000165729 957 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm17038-201ENSMUST00000166586 494 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Mir5112-201ENSMUST00000174897 60 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm22701-201ENSMUST00000175371 291 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm22990-201ENSMUST00000175427 89 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm23187-201ENSMUST00000175746 86 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm18415-201ENSMUST00000177464 647 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm21742-201ENSMUST00000189352 548 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm29141-201ENSMUST00000190357 882 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm38261-201ENSMUST00000192608 316 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm43578-201ENSMUST00000201250 459 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm20948-201ENSMUST00000211091 449 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms