Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PrkdcP97313 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC4.11□□□□□ -1.75
PrkdcP97313 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PrkdcP97313 Gm37760-201ENSMUST00000194726 3841 ntBASIC4.11□□□□□ -1.75
PrkdcP97313 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PrkdcP97313 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
PrkdcP97313 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PrkdcP97313 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Gm15006-201ENSMUST00000121419 1122 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Gm23171-201ENSMUST00000157159 264 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Gm27855-201ENSMUST00000184122 128 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PrkdcP97313 Gm23459-201ENSMUST00000083259 131 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PrkdcP97313 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Myom1-203ENSMUST00000179759 5308 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PrkdcP97313 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
PrkdcP97313 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PrkdcP97313 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Gm14908-201ENSMUST00000120930 1286 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Gm23537-201ENSMUST00000157536 330 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 AC154461.5-201ENSMUST00000225429 774 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PrkdcP97313 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC4.1□□□□□ -1.75
PrkdcP97313 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PrkdcP97313 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PrkdcP97313 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PrkdcP97313 AC116950.1-201ENSMUST00000226322 3250 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC4.1□□□□□ -1.75
PrkdcP97313 Gm11908-201ENSMUST00000117755 347 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Gm15044-201ENSMUST00000120703 598 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Gm23700-201ENSMUST00000158842 102 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Gm8256-201ENSMUST00000169178 453 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Gm8669-201ENSMUST00000183839 945 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Gm38276-201ENSMUST00000192446 1343 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Gm3189-201ENSMUST00000205595 832 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Gm7688-201ENSMUST00000212857 337 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PrkdcP97313 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PrkdcP97313 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PrkdcP97313 Gm16270-201ENSMUST00000160327 3238 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
PrkdcP97313 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
PrkdcP97313 Gm12328-201ENSMUST00000118611 197 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 Gm7927-201ENSMUST00000118818 880 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC4.1□□□□□ -1.75
PrkdcP97313 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC4.1□□□□□ -1.75
PrkdcP97313 n-R5s180-201ENSMUST00000082770 106 ntBASIC4.1□□□□□ -1.75
PrkdcP97313 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PrkdcP97313 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PrkdcP97313 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 AC154141.1-201ENSMUST00000208403 4136 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
PrkdcP97313 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PrkdcP97313 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PrkdcP97313 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PrkdcP97313 Gm25422-201ENSMUST00000104219 129 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.09□□□□□ -1.75
PrkdcP97313 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Gm44213-201ENSMUST00000204977 703 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.09□□□□□ -1.75
PrkdcP97313 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PrkdcP97313 AC158803.2-201ENSMUST00000219452 679 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Gm43788-201ENSMUST00000201539 2417 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms