Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sox3P53784 Gm11893-201ENSMUST00000117829 491 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Gm15149-201ENSMUST00000119370 360 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Gm11504-201ENSMUST00000120211 173 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Sox3P53784 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox3P53784 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.05□□□□□ -1.44
Sox3P53784 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox3P53784 Gm25906-201ENSMUST00000158489 126 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Scarna6-201ENSMUST00000158656 265 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Gm22523-201ENSMUST00000158696 100 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox3P53784 Gm20432-201ENSMUST00000173716 250 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Gm18199-201ENSMUST00000173820 835 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox3P53784 Gm9167-201ENSMUST00000182469 962 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Gm28934-201ENSMUST00000186491 346 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox3P53784 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox3P53784 Gm29813-201ENSMUST00000195856 447 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Gm43157-201ENSMUST00000198223 412 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Sox3P53784 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox3P53784 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.05□□□□□ -1.44
Sox3P53784 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.05□□□□□ -1.44
Sox3P53784 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sox3P53784 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Sox3P53784 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sox3P53784 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sox3P53784 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sox3P53784 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Sox3P53784 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Sox3P53784 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
Sox3P53784 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Sox3P53784 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Sox3P53784 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sox3P53784 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sox3P53784 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sox3P53784 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Sox3P53784 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Sox3P53784 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Sox3P53784 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Sox3P53784 Gm24888-201ENSMUST00000104387 130 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm14529-201ENSMUST00000117894 406 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm8534-201ENSMUST00000118553 766 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm11976-201ENSMUST00000119236 295 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm13222-201ENSMUST00000119638 138 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.04□□□□□ -1.44
Sox3P53784 Gm16112-201ENSMUST00000159075 382 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 Gm22569-201ENSMUST00000175545 124 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.04□□□□□ -1.44
Sox3P53784 Mir7028-201ENSMUST00000185016 64 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.04□□□□□ -1.44
Sox3P53784 Gm44361-201ENSMUST00000197960 94 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm42652-201ENSMUST00000199073 614 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm5990-201ENSMUST00000203126 746 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.04□□□□□ -1.44
Sox3P53784 Gm18103-201ENSMUST00000216621 779 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sox3P53784 Gm36501-201ENSMUST00000221857 745 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm18618-201ENSMUST00000222211 473 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.04□□□□□ -1.44
Sox3P53784 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Sox3P53784 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Sox3P53784 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox3P53784 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.04□□□□□ -1.44
Sox3P53784 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.04□□□□□ -1.44
Sox3P53784 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms