Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Cux1P53564 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Cux1P53564 Gm44416-201ENSMUST00000204055 2066 ntBASIC9.47□□□□□ -0.89
Cux1P53564 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Cux1P53564 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC9.47□□□□□ -0.89
Cux1P53564 Gm11737-201ENSMUST00000118713 468 ntBASIC9.47□□□□□ -0.89
Cux1P53564 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cux1P53564 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC9.47□□□□□ -0.89
Cux1P53564 Gm3008-201ENSMUST00000160566 571 ntBASIC9.47□□□□□ -0.89
Cux1P53564 Gm18343-201ENSMUST00000172802 604 ntBASIC9.47□□□□□ -0.89
Cux1P53564 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cux1P53564 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC9.47□□□□□ -0.89
Cux1P53564 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC9.47□□□□□ -0.89
Cux1P53564 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC9.47□□□□□ -0.89
Cux1P53564 Rybp-ps-201ENSMUST00000069489 681 ntBASIC9.47□□□□□ -0.89
Cux1P53564 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cux1P53564 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Cux1P53564 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cux1P53564 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cux1P53564 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cux1P53564 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cux1P53564 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cux1P53564 AC154406.1-201ENSMUST00000215220 2529 ntBASIC9.47□□□□□ -0.89
Cux1P53564 Gm4973-201ENSMUST00000206925 1334 ntBASIC9.47□□□□□ -0.89
Cux1P53564 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Cux1P53564 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cux1P53564 Gm43981-201ENSMUST00000203285 1467 ntBASIC9.47□□□□□ -0.89
Cux1P53564 Gm44436-201ENSMUST00000204200 1494 ntBASIC9.47□□□□□ -0.89
Cux1P53564 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cux1P53564 AC153152.1-201ENSMUST00000221105 2742 ntBASIC9.47□□□□□ -0.89
Cux1P53564 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Cux1P53564 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cux1P53564 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cux1P53564 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Cux1P53564 Gm12650-201ENSMUST00000121966 258 ntBASIC9.46□□□□□ -0.89
Cux1P53564 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Cux1P53564 Gm18996-201ENSMUST00000214851 755 ntBASIC9.46□□□□□ -0.89
Cux1P53564 Gm6068-201ENSMUST00000222270 387 ntBASIC9.46□□□□□ -0.89
Cux1P53564 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cux1P53564 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Cux1P53564 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC9.46□□□□□ -0.89
Cux1P53564 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cux1P53564 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cux1P53564 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cux1P53564 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC9.46□□□□□ -0.89
Cux1P53564 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cux1P53564 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cux1P53564 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cux1P53564 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC9.46□□□□□ -0.9
Cux1P53564 Gm25415-201ENSMUST00000104220 132 ntBASIC9.46□□□□□ -0.9
Cux1P53564 Gm15531-201ENSMUST00000118062 252 ntBASIC9.46□□□□□ -0.9
Cux1P53564 Gm7927-201ENSMUST00000118818 880 ntBASIC9.46□□□□□ -0.9
Cux1P53564 Gm15331-201ENSMUST00000120225 385 ntBASIC9.46□□□□□ -0.9
Cux1P53564 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC9.46□□□□□ -0.9
Cux1P53564 Gm22235-201ENSMUST00000157085 110 ntBASIC9.46□□□□□ -0.9
Cux1P53564 Gm43744-201ENSMUST00000196387 688 ntBASIC9.46□□□□□ -0.9
Cux1P53564 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cux1P53564 Gm36501-201ENSMUST00000221857 745 ntBASIC9.46□□□□□ -0.9
Cux1P53564 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cux1P53564 AC154806.5-205ENSMUST00000228828 411 ntBASIC9.46□□□□□ -0.9
Cux1P53564 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Cux1P53564 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cux1P53564 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cux1P53564 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cux1P53564 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cux1P53564 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cux1P53564 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Cux1P53564 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cux1P53564 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Cux1P53564 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cux1P53564 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cux1P53564 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Cux1P53564 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Cux1P53564 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Gm14836-201ENSMUST00000118567 471 ntBASIC9.45□□□□□ -0.9
Cux1P53564 Gm7700-201ENSMUST00000120273 970 ntBASIC9.45□□□□□ -0.9
Cux1P53564 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC9.45□□□□□ -0.9
Cux1P53564 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC9.45□□□□□ -0.9
Cux1P53564 Gm29813-201ENSMUST00000195856 447 ntBASIC9.45□□□□□ -0.9
Cux1P53564 Gm44494-201ENSMUST00000196760 129 ntBASIC9.45□□□□□ -0.9
Cux1P53564 Gm43456-201ENSMUST00000202519 457 ntBASIC9.45□□□□□ -0.9
Cux1P53564 Gm7825-201ENSMUST00000204046 416 ntBASIC9.45□□□□□ -0.9
Cux1P53564 AC132384.3-201ENSMUST00000219709 472 ntBASIC9.45□□□□□ -0.9
Cux1P53564 AC117797.1-201ENSMUST00000223977 695 ntBASIC9.45□□□□□ -0.9
Cux1P53564 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cux1P53564 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cux1P53564 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms