Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Cdx2P43241 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Gm43728-201ENSMUST00000198817 2622 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Gm12901-201ENSMUST00000118690 532 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 Gm13013-201ENSMUST00000119087 523 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 Gm12768-201ENSMUST00000120055 759 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 Gm22094-201ENSMUST00000158976 117 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 Gm3715-201ENSMUST00000172308 617 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 Gm2058-201ENSMUST00000178791 560 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Gm29745-201ENSMUST00000198005 687 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Gm8863-201ENSMUST00000216630 926 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Cdx2P43241 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Cdx2P43241 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Cdx2P43241 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Cdx2P43241 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.99□□□□□ -1.45
Cdx2P43241 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdx2P43241 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdx2P43241 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdx2P43241 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cdx2P43241 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdx2P43241 Gm37347-201ENSMUST00000193969 3071 ntBASIC5.98□□□□□ -1.45
Cdx2P43241 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdx2P43241 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Cdx2P43241 Gm45290-201ENSMUST00000211177 3890 ntBASIC5.98□□□□□ -1.45
Cdx2P43241 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.98□□□□□ -1.45
Cdx2P43241 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdx2P43241 Gm11984-201ENSMUST00000118142 766 ntBASIC5.98□□□□□ -1.45
Cdx2P43241 Gm14115-201ENSMUST00000119242 482 ntBASIC5.98□□□□□ -1.45
Cdx2P43241 Gm13998-201ENSMUST00000120952 335 ntBASIC5.98□□□□□ -1.45
Cdx2P43241 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.98□□□□□ -1.45
Cdx2P43241 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.98□□□□□ -1.45
Cdx2P43241 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cdx2P43241 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.98□□□□□ -1.45
Cdx2P43241 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdx2P43241 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.98□□□□□ -1.45
Cdx2P43241 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cdx2P43241 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Cdx2P43241 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdx2P43241 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdx2P43241 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cdx2P43241 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdx2P43241 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Cdx2P43241 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.98□□□□□ -1.45
Cdx2P43241 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Gm37107-201ENSMUST00000195326 2552 ntBASIC5.98□□□□□ -1.45
Cdx2P43241 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdx2P43241 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Cdx2P43241 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC5.98□□□□□ -1.45
Cdx2P43241 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms