Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.37□□□□□ -1.23
Traf1P39428 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC7.37□□□□□ -1.23
Traf1P39428 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.37□□□□□ -1.23
Traf1P39428 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.37□□□□□ -1.23
Traf1P39428 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Gm3266-201ENSMUST00000217832 591 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Gm18601-201ENSMUST00000220831 634 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Gm9321-201ENSMUST00000221179 778 ntBASIC7.37□□□□□ -1.23
Traf1P39428 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.37□□□□□ -1.23
Traf1P39428 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 Mir3068-201ENSMUST00000083004 136 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Traf1P39428 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Traf1P39428 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.36□□□□□ -1.23
Traf1P39428 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Traf1P39428 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 AC154368.2-201ENSMUST00000222334 1724 ntBASIC7.36□□□□□ -1.23
Traf1P39428 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.36□□□□□ -1.23
Traf1P39428 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC7.36□□□□□ -1.23
Traf1P39428 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 Mir680-1-201ENSMUST00000102257 109 ntBASIC7.36□□□□□ -1.23
Traf1P39428 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Traf1P39428 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 Gm15786-201ENSMUST00000121079 450 ntBASIC7.36□□□□□ -1.23
Traf1P39428 Mir6337-201ENSMUST00000184194 105 ntBASIC7.36□□□□□ -1.23
Traf1P39428 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC7.36□□□□□ -1.23
Traf1P39428 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.36□□□□□ -1.23
Traf1P39428 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.36□□□□□ -1.23
Traf1P39428 Gm38574-201ENSMUST00000211855 640 ntBASIC7.36□□□□□ -1.23
Traf1P39428 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.36□□□□□ -1.23
Traf1P39428 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.36□□□□□ -1.23
Traf1P39428 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Traf1P39428 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Traf1P39428 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.36□□□□□ -1.23
Traf1P39428 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Traf1P39428 Gm37864-201ENSMUST00000195308 3075 ntBASIC7.36□□□□□ -1.23
Traf1P39428 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.36□□□□□ -1.23
Traf1P39428 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.36□□□□□ -1.23
Traf1P39428 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.36□□□□□ -1.23
Traf1P39428 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Traf1P39428 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Traf1P39428 Gm43282-201ENSMUST00000201848 2157 ntBASIC7.36□□□□□ -1.23
Traf1P39428 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
Traf1P39428 Gm37531-201ENSMUST00000191628 5415 ntBASIC7.36□□□□□ -1.23
Traf1P39428 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.35□□□□□ -1.23
Traf1P39428 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Traf1P39428 Mir711-201ENSMUST00000102188 82 ntBASIC7.35□□□□□ -1.23
Traf1P39428 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Traf1P39428 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Traf1P39428 Gm12189-201ENSMUST00000119779 912 ntBASIC7.35□□□□□ -1.23
Traf1P39428 Gm12618-201ENSMUST00000121754 483 ntBASIC7.35□□□□□ -1.23
Traf1P39428 Mir1903-201ENSMUST00000122574 80 ntBASIC7.35□□□□□ -1.23
Traf1P39428 Gm24383-201ENSMUST00000122691 333 ntBASIC7.35□□□□□ -1.23
Traf1P39428 Gm11545-201ENSMUST00000146507 375 ntBASIC7.35□□□□□ -1.23
Traf1P39428 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Gm18799-201ENSMUST00000189104 913 ntBASIC7.35□□□□□ -1.23
Traf1P39428 Gm37103-201ENSMUST00000191830 115 ntBASIC7.35□□□□□ -1.23
Traf1P39428 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.35□□□□□ -1.23
Traf1P39428 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC7.35□□□□□ -1.23
Traf1P39428 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.35□□□□□ -1.23
Traf1P39428 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.35□□□□□ -1.23
Traf1P39428 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC7.35□□□□□ -1.23
Traf1P39428 AC154795.1-201ENSMUST00000225611 364 ntBASIC7.35□□□□□ -1.23
Traf1P39428 AC131029.2-201ENSMUST00000226696 628 ntBASIC7.35□□□□□ -1.23
Traf1P39428 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Traf1P39428 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Traf1P39428 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms