Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm7557-201ENSMUST00000221935 865 ntBASIC8.34□□□□□ -1.07
Col18a1P39061 Mir133b-201ENSMUST00000083546 119 ntBASIC8.34□□□□□ -1.07
Col18a1P39061 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Col18a1P39061 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Col18a1P39061 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC8.34□□□□□ -1.07
Col18a1P39061 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm18300-201ENSMUST00000192792 1406 ntBASIC8.34□□□□□ -1.08
Col18a1P39061 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Col18a1P39061 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
Col18a1P39061 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm14854-201ENSMUST00000117758 841 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 Gm15719-201ENSMUST00000120619 635 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC8.33□□□□□ -1.08
Col18a1P39061 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28976-201ENSMUST00000188070 144 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 Gm37774-201ENSMUST00000194401 245 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 Gm44456-201ENSMUST00000196554 89 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 Gm9710-201ENSMUST00000198053 499 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 CT025579.3-201ENSMUST00000224543 451 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 AL450321.1-201ENSMUST00000220600 3550 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 AC158595.1-201ENSMUST00000217989 1435 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
Col18a1P39061 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms