Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Hoxc11P31313 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Hoxc11P31313 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Hoxc11P31313 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Hoxc11P31313 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Cmah-208ENSMUST00000224819 9482 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm14772-201ENSMUST00000116562 514 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm8250-201ENSMUST00000117398 774 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm14375-201ENSMUST00000119490 855 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm4910-201ENSMUST00000119605 366 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm6620-201ENSMUST00000120113 715 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm15181-201ENSMUST00000120142 177 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm11504-201ENSMUST00000120211 173 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm15696-201ENSMUST00000121730 445 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm3810-201ENSMUST00000122413 476 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm20691-201ENSMUST00000176889 333 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm18006-201ENSMUST00000177411 662 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm10410-201ENSMUST00000180138 384 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm26898-201ENSMUST00000181678 384 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm8183-201ENSMUST00000183134 980 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Mir7082-201ENSMUST00000183526 92 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm2979-201ENSMUST00000193442 463 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm45845-201ENSMUST00000207326 582 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm19196-201ENSMUST00000209258 357 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm19201-201ENSMUST00000210127 778 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm18781-201ENSMUST00000211252 924 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm4822-201ENSMUST00000077551 479 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Olfr687-201ENSMUST00000098154 938 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Gm42455-201ENSMUST00000199761 2736 ntBASIC6.32□□□□□ -1.4
Hoxc11P31313 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxc11P31313 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Hoxc11P31313 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Hoxc11P31313 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm26422-201ENSMUST00000104276 132 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm15502-201ENSMUST00000121449 208 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm23430-201ENSMUST00000122490 314 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms