Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC5.16□□□□□ -1.58
Cdx1P18111 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.16□□□□□ -1.58
Cdx1P18111 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm16298-201ENSMUST00000161107 420 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.16□□□□□ -1.58
Cdx1P18111 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Cdx1P18111 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm38022-201ENSMUST00000191762 403 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Gm44896-201ENSMUST00000206190 772 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cdx1P18111 AL713985.1-201ENSMUST00000219030 420 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Gm35638-201ENSMUST00000220724 652 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 AC156790.1-201ENSMUST00000226572 559 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 CT030238.3-201ENSMUST00000227352 875 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm4822-201ENSMUST00000077551 479 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cdx1P18111 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm37470-201ENSMUST00000193378 2798 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cdx1P18111 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx1P18111 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.15□□□□□ -1.58
Cdx1P18111 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx1P18111 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx1P18111 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx1P18111 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx1P18111 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.15□□□□□ -1.58
Cdx1P18111 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.15□□□□□ -1.58
Cdx1P18111 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Cdx1P18111 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
Cdx1P18111 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Cdx1P18111 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Cdx1P18111 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx1P18111 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Cdx1P18111 Gm25093-201ENSMUST00000103993 132 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm26416-201ENSMUST00000104280 134 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Cdx1P18111 Gm13196-201ENSMUST00000118297 379 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm11889-201ENSMUST00000118402 1079 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm8812-201ENSMUST00000118496 412 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm13940-201ENSMUST00000121023 301 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm12140-201ENSMUST00000121214 544 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm11257-201ENSMUST00000121313 315 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm14251-201ENSMUST00000122133 279 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC5.15□□□□□ -1.59
Cdx1P18111 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Gm16026-205ENSMUST00000162923 641 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm4613-201ENSMUST00000165488 276 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Cdx1P18111 Gm9285-201ENSMUST00000177691 697 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm27360-201ENSMUST00000183487 80 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29048-201ENSMUST00000185342 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29403-201ENSMUST00000185491 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28234-201ENSMUST00000185657 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28248-201ENSMUST00000186093 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29633-202ENSMUST00000186217 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28829-201ENSMUST00000186231 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28261-201ENSMUST00000186417 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28815-201ENSMUST00000186751 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28608-201ENSMUST00000186860 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28122-201ENSMUST00000187088 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28420-201ENSMUST00000187340 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28106-201ENSMUST00000187640 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28698-201ENSMUST00000187734 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29224-201ENSMUST00000187965 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29189-201ENSMUST00000188018 615 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms