Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm18852-201ENSMUST00000184149 3593 ntBASIC7.26□□□□□ -1.25
Col1a1P11087 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col1a1P11087 AC174459.1-201ENSMUST00000224476 1943 ntBASIC7.26□□□□□ -1.25
Col1a1P11087 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col1a1P11087 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col1a1P11087 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col1a1P11087 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Col1a1P11087 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Col1a1P11087 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC7.26□□□□□ -1.25
Col1a1P11087 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Col1a1P11087 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Gm13811-201ENSMUST00000117800 256 ntBASIC7.25□□□□□ -1.25
Col1a1P11087 Gm14158-201ENSMUST00000118409 308 ntBASIC7.25□□□□□ -1.25
Col1a1P11087 Gm26489-201ENSMUST00000157880 264 ntBASIC7.25□□□□□ -1.25
Col1a1P11087 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col1a1P11087 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
Col1a1P11087 Mir7006-201ENSMUST00000183624 69 ntBASIC7.25□□□□□ -1.25
Col1a1P11087 Gm29454-201ENSMUST00000190805 393 ntBASIC7.25□□□□□ -1.25
Col1a1P11087 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC7.25□□□□□ -1.25
Col1a1P11087 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.25□□□□□ -1.25
Col1a1P11087 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC7.25□□□□□ -1.25
Col1a1P11087 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col1a1P11087 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Col1a1P11087 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col1a1P11087 Mir218-2-201ENSMUST00000083649 110 ntBASIC7.25□□□□□ -1.25
Col1a1P11087 Gm7676-201ENSMUST00000084055 319 ntBASIC7.25□□□□□ -1.25
Col1a1P11087 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.25□□□□□ -1.25
Col1a1P11087 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Col1a1P11087 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.25□□□□□ -1.25
Col1a1P11087 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.25□□□□□ -1.25
Col1a1P11087 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.25□□□□□ -1.25
Col1a1P11087 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC7.25□□□□□ -1.25
Col1a1P11087 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC7.25□□□□□ -1.25
Col1a1P11087 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Col1a1P11087 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col1a1P11087 AC107453.1-201ENSMUST00000227490 3268 ntBASIC7.25□□□□□ -1.25
Col1a1P11087 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Col1a1P11087 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col1a1P11087 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC7.24□□□□□ -1.25
Col1a1P11087 Mir449c-201ENSMUST00000102192 109 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm25415-201ENSMUST00000104220 132 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm22592-201ENSMUST00000104242 131 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm14512-201ENSMUST00000117924 230 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm13493-201ENSMUST00000120318 493 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm13899-201ENSMUST00000121519 1255 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm11804-201ENSMUST00000121663 468 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm15335-201ENSMUST00000122442 411 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm22261-201ENSMUST00000158691 324 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm16112-201ENSMUST00000159075 382 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC7.24□□□□□ -1.25
Col1a1P11087 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm21399-201ENSMUST00000180210 597 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm5708-201ENSMUST00000196289 886 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm7838-201ENSMUST00000203221 1189 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC7.24□□□□□ -1.25
Col1a1P11087 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.24□□□□□ -1.25
Col1a1P11087 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Col1a1P11087 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC7.24□□□□□ -1.25
Col1a1P11087 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col1a1P11087 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm37686-201ENSMUST00000194099 2309 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm7680-201ENSMUST00000216198 1348 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm26078-201ENSMUST00000104067 128 ntBASIC7.24□□□□□ -1.25
Col1a1P11087 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col1a1P11087 Gm22106-201ENSMUST00000122544 127 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms