Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Speer3W4VSP1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Speer3W4VSP1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Speer3W4VSP1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Speer3W4VSP1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Speer3W4VSP1 Gm15823-201ENSMUST00000064305 670 ntBASIC18.36■□□□□ 0.53
Speer3W4VSP1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Speer3W4VSP1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Speer3W4VSP1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Speer3W4VSP1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Speer3W4VSP1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Speer3W4VSP1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.34■□□□□ 0.53
Speer3W4VSP1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Speer3W4VSP1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Speer3W4VSP1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.33■□□□□ 0.53
Speer3W4VSP1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Speer3W4VSP1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Speer3W4VSP1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Speer3W4VSP1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Speer3W4VSP1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Speer3W4VSP1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.33■□□□□ 0.52
Speer3W4VSP1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Speer3W4VSP1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Speer3W4VSP1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Gm10493-201ENSMUST00000097270 612 ntBASIC18.33■□□□□ 0.52
Speer3W4VSP1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Speer3W4VSP1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Speer3W4VSP1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.32■□□□□ 0.52
Speer3W4VSP1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Speer3W4VSP1 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.32■□□□□ 0.52
Speer3W4VSP1 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.32■□□□□ 0.52
Speer3W4VSP1 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.32■□□□□ 0.52
Speer3W4VSP1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Speer3W4VSP1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Speer3W4VSP1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Speer3W4VSP1 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.32■□□□□ 0.52
Speer3W4VSP1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Speer3W4VSP1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.32■□□□□ 0.52
Speer3W4VSP1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Speer3W4VSP1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Speer3W4VSP1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Speer3W4VSP1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Speer3W4VSP1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Speer3W4VSP1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Speer3W4VSP1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.31■□□□□ 0.52
Speer3W4VSP1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms