Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.08■□□□□ 0.49
H2afb2S4R1M3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
H2afb2S4R1M3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
H2afb2S4R1M3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
H2afb2S4R1M3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2afb2S4R1M3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
H2afb2S4R1M3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2afb2S4R1M3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2afb2S4R1M3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb2S4R1M3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Mir5133-201ENSMUST00000174955 77 ntBASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
H2afb2S4R1M3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Gm37179-201ENSMUST00000194862 823 ntBASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb2S4R1M3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
H2afb2S4R1M3 Gm13148-201ENSMUST00000118892 745 ntBASIC18.04■□□□□ 0.48
H2afb2S4R1M3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.04■□□□□ 0.48
H2afb2S4R1M3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb2S4R1M3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb2S4R1M3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb2S4R1M3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb2S4R1M3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb2S4R1M3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb2S4R1M3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
H2afb2S4R1M3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.02■□□□□ 0.47
H2afb2S4R1M3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms