Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn3Q9Z0G9 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.28■□□□□ 0.52
Cldn3Q9Z0G9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cldn3Q9Z0G9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Cldn3Q9Z0G9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn3Q9Z0G9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cldn3Q9Z0G9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.27■□□□□ 0.52
Cldn3Q9Z0G9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn3Q9Z0G9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn3Q9Z0G9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn3Q9Z0G9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn3Q9Z0G9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cldn3Q9Z0G9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.27■□□□□ 0.51
Cldn3Q9Z0G9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Cldn3Q9Z0G9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn3Q9Z0G9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn3Q9Z0G9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Gm4968-201ENSMUST00000071458 858 ntBASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn3Q9Z0G9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Gm2399-201ENSMUST00000104944 225 ntBASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn3Q9Z0G9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn3Q9Z0G9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms