Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Tgds-204ENSMUST00000228543 1594 ntBASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cx3cr1Q9Z0D9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Gm9847-201ENSMUST00000052528 599 ntBASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cx3cr1Q9Z0D9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cx3cr1Q9Z0D9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cx3cr1Q9Z0D9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cr1Q9Z0D9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Cx3cr1Q9Z0D9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cr1Q9Z0D9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cr1Q9Z0D9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cx3cr1Q9Z0D9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cr1Q9Z0D9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cr1Q9Z0D9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cr1Q9Z0D9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cr1Q9Z0D9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms