Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Gm6659-201ENSMUST00000174752 547 ntBASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn5Q9WVD4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn5Q9WVD4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn5Q9WVD4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn5Q9WVD4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn5Q9WVD4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.68■□□□□ 0.58
Clcn5Q9WVD4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.68■□□□□ 0.58
Clcn5Q9WVD4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn5Q9WVD4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn5Q9WVD4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Gm30025-201ENSMUST00000218555 728 ntBASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Clcn5Q9WVD4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 Gm21814-202ENSMUST00000203277 873 ntBASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn5Q9WVD4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Clcn5Q9WVD4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn5Q9WVD4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn5Q9WVD4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn5Q9WVD4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Clcn5Q9WVD4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn5Q9WVD4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn5Q9WVD4 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.65■□□□□ 0.58
Clcn5Q9WVD4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn5Q9WVD4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn5Q9WVD4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn5Q9WVD4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn5Q9WVD4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.64■□□□□ 0.58
Clcn5Q9WVD4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn5Q9WVD4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn5Q9WVD4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms