Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn5Q9WU28 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn5Q9WU28 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Pfdn5Q9WU28 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn5Q9WU28 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Gm22238-201ENSMUST00000175222 88 ntBASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn5Q9WU28 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Pfdn5Q9WU28 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Serp2-204ENSMUST00000228055 705 ntBASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.79□□□□□ -0.04
Pfdn5Q9WU28 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Haglr-201ENSMUST00000100000 2085 ntBASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn5Q9WU28 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pfdn5Q9WU28 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pfdn5Q9WU28 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.77□□□□□ -0.04
Pfdn5Q9WU28 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Pfdn5Q9WU28 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pfdn5Q9WU28 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pfdn5Q9WU28 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pfdn5Q9WU28 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pfdn5Q9WU28 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pfdn5Q9WU28 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pfdn5Q9WU28 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pfdn5Q9WU28 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms