Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atp6ap1Q9R1Q9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atp6ap1Q9R1Q9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Atp6ap1Q9R1Q9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atp6ap1Q9R1Q9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Atp6ap1Q9R1Q9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Atp6ap1Q9R1Q9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atp6ap1Q9R1Q9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atp6ap1Q9R1Q9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atp6ap1Q9R1Q9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atp6ap1Q9R1Q9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 Gm2399-201ENSMUST00000104944 225 ntBASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.67■□□□□ 0.42
Atp6ap1Q9R1Q9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp6ap1Q9R1Q9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp6ap1Q9R1Q9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 Gm4968-201ENSMUST00000071458 858 ntBASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp6ap1Q9R1Q9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Gm29257-201ENSMUST00000186115 639 ntBASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp6ap1Q9R1Q9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms