Protein–RNA interactions for Protein: Q9R0P9

Uchl1, Ubiquitin carboxyl-terminal hydrolase isozyme L1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl1Q9R0P9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uchl1Q9R0P9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uchl1Q9R0P9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Uchl1Q9R0P9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Uchl1Q9R0P9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Uchl1Q9R0P9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Uchl1Q9R0P9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Uchl1Q9R0P9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Uchl1Q9R0P9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
Uchl1Q9R0P9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Uchl1Q9R0P9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Uchl1Q9R0P9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Uchl1Q9R0P9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Uchl1Q9R0P9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Uchl1Q9R0P9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Uchl1Q9R0P9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Uchl1Q9R0P9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Uchl1Q9R0P9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Uchl1Q9R0P9 Gm12251-201ENSMUST00000117893 792 ntBASIC15.94■□□□□ 0.14
Uchl1Q9R0P9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.94■□□□□ 0.14
Uchl1Q9R0P9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.94■□□□□ 0.14
Uchl1Q9R0P9 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms