Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Vps29Q9QZ88 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Vps29Q9QZ88 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps29Q9QZ88 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps29Q9QZ88 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps29Q9QZ88 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps29Q9QZ88 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Gm7290-201ENSMUST00000104990 617 ntBASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Gm12918-201ENSMUST00000120234 636 ntBASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Gm15710-201ENSMUST00000121821 636 ntBASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Gm5075-201ENSMUST00000196916 622 ntBASIC17.27■□□□□ 0.36
Vps29Q9QZ88 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps29Q9QZ88 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Vps29Q9QZ88 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps29Q9QZ88 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps29Q9QZ88 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps29Q9QZ88 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.25■□□□□ 0.35
Vps29Q9QZ88 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps29Q9QZ88 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Vps29Q9QZ88 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps29Q9QZ88 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms