Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim44Q9QXA7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.95■□□□□ 0.94
Trim44Q9QXA7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.95■□□□□ 0.94
Trim44Q9QXA7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim44Q9QXA7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim44Q9QXA7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.95■□□□□ 0.94
Trim44Q9QXA7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim44Q9QXA7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim44Q9QXA7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim44Q9QXA7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim44Q9QXA7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim44Q9QXA7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim44Q9QXA7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim44Q9QXA7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim44Q9QXA7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim44Q9QXA7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim44Q9QXA7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim44Q9QXA7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim44Q9QXA7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim44Q9QXA7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim44Q9QXA7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trim44Q9QXA7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Trim44Q9QXA7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Trim44Q9QXA7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Gm43530-201ENSMUST00000195920 274 ntBASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim44Q9QXA7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim44Q9QXA7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim44Q9QXA7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trim44Q9QXA7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim44Q9QXA7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim44Q9QXA7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim44Q9QXA7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim44Q9QXA7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim44Q9QXA7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim44Q9QXA7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim44Q9QXA7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Gm8969-201ENSMUST00000199694 526 ntBASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim44Q9QXA7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trim44Q9QXA7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim44Q9QXA7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim44Q9QXA7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim44Q9QXA7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim44Q9QXA7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trim44Q9QXA7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim44Q9QXA7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim44Q9QXA7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim44Q9QXA7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim44Q9QXA7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim44Q9QXA7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim44Q9QXA7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim44Q9QXA7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim44Q9QXA7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim44Q9QXA7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim44Q9QXA7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim44Q9QXA7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim44Q9QXA7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim44Q9QXA7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms