Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sec61a2Q9JLR1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sec61a2Q9JLR1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.26■□□□□ 0.19
Sec61a2Q9JLR1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Rarb-207ENSMUST00000225921 2756 ntBASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.25■□□□□ 0.19
Sec61a2Q9JLR1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a2Q9JLR1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a2Q9JLR1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sec61a2Q9JLR1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Sec61a2Q9JLR1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a2Q9JLR1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a2Q9JLR1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a2Q9JLR1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a2Q9JLR1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Sec61a2Q9JLR1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a2Q9JLR1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.21■□□□□ 0.19
Sec61a2Q9JLR1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.21■□□□□ 0.19
Sec61a2Q9JLR1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sec61a2Q9JLR1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sec61a2Q9JLR1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms