Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1fQ9JIS7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Cacna1fQ9JIS7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1fQ9JIS7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1fQ9JIS7 Gm16061-201ENSMUST00000122167 857 ntBASIC20.65■□□□□ 0.9
Cacna1fQ9JIS7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cacna1fQ9JIS7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cacna1fQ9JIS7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cacna1fQ9JIS7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.64■□□□□ 0.89
Cacna1fQ9JIS7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Cacna1fQ9JIS7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1fQ9JIS7 AA414768-201ENSMUST00000121924 1257 ntBASIC20.64■□□□□ 0.89
Cacna1fQ9JIS7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1fQ9JIS7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.64■□□□□ 0.89
Cacna1fQ9JIS7 Gm10517-202ENSMUST00000192970 758 ntBASIC20.64■□□□□ 0.89
Cacna1fQ9JIS7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1fQ9JIS7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1fQ9JIS7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1fQ9JIS7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1fQ9JIS7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1fQ9JIS7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Gm7370-201ENSMUST00000219471 767 ntBASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1fQ9JIS7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1fQ9JIS7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 BC021767-201ENSMUST00000126387 1716 ntBASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Cacna1fQ9JIS7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1fQ9JIS7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1fQ9JIS7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1fQ9JIS7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1fQ9JIS7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.6■□□□□ 0.89
Cacna1fQ9JIS7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1fQ9JIS7 Gm37025-201ENSMUST00000195159 829 ntBASIC20.6■□□□□ 0.89
Cacna1fQ9JIS7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1fQ9JIS7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1fQ9JIS7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Cacna1fQ9JIS7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cacna1fQ9JIS7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1fQ9JIS7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Gm21362-201ENSMUST00000194272 928 ntBASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1fQ9JIS7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1fQ9JIS7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1fQ9JIS7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1fQ9JIS7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.58■□□□□ 0.89
Cacna1fQ9JIS7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1fQ9JIS7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1fQ9JIS7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms