Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rhox4bQ9JI43 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rhox4bQ9JI43 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rhox4bQ9JI43 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Rhox4bQ9JI43 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Rhox4bQ9JI43 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rhox4bQ9JI43 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rhox4bQ9JI43 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
Rhox4bQ9JI43 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.59□□□□□ -0.07
Rhox4bQ9JI43 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.59□□□□□ -0.07
Rhox4bQ9JI43 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rhox4bQ9JI43 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rhox4bQ9JI43 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rhox4bQ9JI43 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rhox4bQ9JI43 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rhox4bQ9JI43 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rhox4bQ9JI43 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Rhox4bQ9JI43 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.56□□□□□ -0.08
Rhox4bQ9JI43 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rhox4bQ9JI43 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms