Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1cQ9ES64 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Ush1cQ9ES64 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1cQ9ES64 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1cQ9ES64 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1cQ9ES64 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Gm45417-201ENSMUST00000209533 758 ntBASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1cQ9ES64 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1cQ9ES64 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ush1cQ9ES64 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ush1cQ9ES64 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Ush1cQ9ES64 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ush1cQ9ES64 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ush1cQ9ES64 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ush1cQ9ES64 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ush1cQ9ES64 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ush1cQ9ES64 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ush1cQ9ES64 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ush1cQ9ES64 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ush1cQ9ES64 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ush1cQ9ES64 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.63■□□□□ 0.89
Ush1cQ9ES64 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.63■□□□□ 0.89
Ush1cQ9ES64 Gm8969-201ENSMUST00000199694 526 ntBASIC20.63■□□□□ 0.89
Ush1cQ9ES64 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ush1cQ9ES64 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ush1cQ9ES64 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ush1cQ9ES64 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ush1cQ9ES64 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1cQ9ES64 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1cQ9ES64 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1cQ9ES64 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1cQ9ES64 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1cQ9ES64 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1cQ9ES64 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1cQ9ES64 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1cQ9ES64 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.6■□□□□ 0.89
Ush1cQ9ES64 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1cQ9ES64 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1cQ9ES64 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1cQ9ES64 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1cQ9ES64 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms