Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Gm10653-202ENSMUST00000139570 835 ntBASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tlr9Q9EQU3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr9Q9EQU3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr9Q9EQU3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.91■□□□□ 0.62
Tlr9Q9EQU3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr9Q9EQU3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr9Q9EQU3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr9Q9EQU3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Tlr9Q9EQU3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.91■□□□□ 0.62
Tlr9Q9EQU3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr9Q9EQU3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr9Q9EQU3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr9Q9EQU3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tlr9Q9EQU3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.9■□□□□ 0.62
Tlr9Q9EQU3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tlr9Q9EQU3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Tlr9Q9EQU3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tlr9Q9EQU3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Gm22240-201ENSMUST00000175225 82 ntBASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Gm10252-201ENSMUST00000209541 832 ntBASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tlr9Q9EQU3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tlr9Q9EQU3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms