Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgn3Q9DCB1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgn3Q9DCB1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.96■□□□□ 0.31
Hmgn3Q9DCB1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgn3Q9DCB1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgn3Q9DCB1 Gm7860-201ENSMUST00000121190 879 ntBASIC16.96■□□□□ 0.31
Hmgn3Q9DCB1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgn3Q9DCB1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgn3Q9DCB1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgn3Q9DCB1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgn3Q9DCB1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Hmgn3Q9DCB1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmgn3Q9DCB1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmgn3Q9DCB1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgn3Q9DCB1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.94■□□□□ 0.3
Hmgn3Q9DCB1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgn3Q9DCB1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgn3Q9DCB1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms