Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne8Q9DC53 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne8Q9DC53 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpne8Q9DC53 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpne8Q9DC53 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpne8Q9DC53 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpne8Q9DC53 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpne8Q9DC53 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne8Q9DC53 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne8Q9DC53 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cpne8Q9DC53 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.83■□□□□ 0.6
Cpne8Q9DC53 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cpne8Q9DC53 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne8Q9DC53 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 Gm8495-201ENSMUST00000188740 694 ntBASIC18.82■□□□□ 0.6
Cpne8Q9DC53 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne8Q9DC53 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Gm13148-201ENSMUST00000118892 745 ntBASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne8Q9DC53 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne8Q9DC53 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne8Q9DC53 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cpne8Q9DC53 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cpne8Q9DC53 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne8Q9DC53 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.8■□□□□ 0.6
Cpne8Q9DC53 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne8Q9DC53 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne8Q9DC53 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.8■□□□□ 0.6
Cpne8Q9DC53 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne8Q9DC53 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.8■□□□□ 0.6
Cpne8Q9DC53 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne8Q9DC53 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Cpne8Q9DC53 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne8Q9DC53 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne8Q9DC53 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne8Q9DC53 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne8Q9DC53 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne8Q9DC53 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cpne8Q9DC53 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne8Q9DC53 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.78■□□□□ 0.6
Cpne8Q9DC53 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne8Q9DC53 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne8Q9DC53 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne8Q9DC53 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne8Q9DC53 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne8Q9DC53 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne8Q9DC53 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.77■□□□□ 0.6
Cpne8Q9DC53 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne8Q9DC53 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpne8Q9DC53 Gm6211-202ENSMUST00000167849 925 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms