Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Rrp8Q9DB85 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrp8Q9DB85 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Gm21362-201ENSMUST00000194272 928 ntBASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rrp8Q9DB85 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rrp8Q9DB85 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rrp8Q9DB85 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rrp8Q9DB85 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rrp8Q9DB85 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Rrp8Q9DB85 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rrp8Q9DB85 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.68■□□□□ 0.42
Rrp8Q9DB85 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rrp8Q9DB85 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rrp8Q9DB85 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rrp8Q9DB85 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rrp8Q9DB85 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rrp8Q9DB85 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Gm7367-201ENSMUST00000057611 492 ntBASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Rrp8Q9DB85 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms