Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf3c6Q9D8P7 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.25■□□□□ 0.67
Gtf3c6Q9D8P7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Gtf3c6Q9D8P7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf3c6Q9D8P7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gtf3c6Q9D8P7 Fst-202ENSMUST00000223640 2612 ntBASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Gm13148-201ENSMUST00000118892 745 ntBASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf3c6Q9D8P7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Gm12933-201ENSMUST00000120203 872 ntBASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf3c6Q9D8P7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Gm26524-201ENSMUST00000192339 390 ntBASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf3c6Q9D8P7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Mir5133-201ENSMUST00000174955 77 ntBASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf3c6Q9D8P7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Gm37179-201ENSMUST00000194862 823 ntBASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.19■□□□□ 0.66
Gtf3c6Q9D8P7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms