Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn22Q9D7U6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn22Q9D7U6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn22Q9D7U6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.15■□□□□ 0.5
Cldn22Q9D7U6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.15■□□□□ 0.5
Cldn22Q9D7U6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn22Q9D7U6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cldn22Q9D7U6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.14■□□□□ 0.49
Cldn22Q9D7U6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Rab3c-203ENSMUST00000224180 967 ntBASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn22Q9D7U6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn22Q9D7U6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn22Q9D7U6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn22Q9D7U6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.12■□□□□ 0.49
Cldn22Q9D7U6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn22Q9D7U6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn22Q9D7U6 Gm20760-201ENSMUST00000179197 648 ntBASIC18.12■□□□□ 0.49
Cldn22Q9D7U6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cldn22Q9D7U6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn22Q9D7U6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn22Q9D7U6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Cldn22Q9D7U6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Gm37856-201ENSMUST00000191634 999 ntBASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn22Q9D7U6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn22Q9D7U6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.09■□□□□ 0.49
Cldn22Q9D7U6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn22Q9D7U6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn22Q9D7U6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.09■□□□□ 0.49
Cldn22Q9D7U6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.09■□□□□ 0.49
Cldn22Q9D7U6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn22Q9D7U6 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.09■□□□□ 0.49
Cldn22Q9D7U6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn22Q9D7U6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn22Q9D7U6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn22Q9D7U6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn22Q9D7U6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn22Q9D7U6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
Cldn22Q9D7U6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn22Q9D7U6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms