Protein–RNA interactions for Protein: Q9D384

Snrnp35, U11/U12 small nuclear ribonucleoprotein 35 kDa protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp35Q9D384 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp35Q9D384 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp35Q9D384 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp35Q9D384 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
Snrnp35Q9D384 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp35Q9D384 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Snrnp35Q9D384 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp35Q9D384 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp35Q9D384 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp35Q9D384 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Snrnp35Q9D384 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp35Q9D384 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Flg-201ENSMUST00000050758 1488 ntBASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Gm12441-201ENSMUST00000121806 588 ntBASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Gm38285-201ENSMUST00000192928 922 ntBASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Gm2559-201ENSMUST00000201323 363 ntBASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Zfp783-201ENSMUST00000095946 670 ntBASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Snrnp35Q9D384 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Snrnp35Q9D384 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp35Q9D384 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp35Q9D384 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.18■□□□□ 0.82
Snrnp35Q9D384 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp35Q9D384 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp35Q9D384 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp35Q9D384 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp35Q9D384 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.18■□□□□ 0.82
Snrnp35Q9D384 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Snrnp35Q9D384 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp35Q9D384 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.17■□□□□ 0.82
Snrnp35Q9D384 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.17■□□□□ 0.82
Snrnp35Q9D384 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Snrnp35Q9D384 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Snrnp35Q9D384 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp35Q9D384 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Snrnp35Q9D384 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp35Q9D384 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp35Q9D384 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp35Q9D384 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp35Q9D384 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Gm12896-201ENSMUST00000118430 226 ntBASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Gm11927-201ENSMUST00000118472 759 ntBASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Dio3-201ENSMUST00000097228 1449 ntBASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp35Q9D384 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Snrnp35Q9D384 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.14■□□□□ 0.82
Snrnp35Q9D384 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Snrnp35Q9D384 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp35Q9D384 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp35Q9D384 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp35Q9D384 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp35Q9D384 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms