Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.15■□□□□ 0.34
Upk1aQ9D132 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.15■□□□□ 0.34
Upk1aQ9D132 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Upk1aQ9D132 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.14■□□□□ 0.33
Upk1aQ9D132 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk1aQ9D132 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.13■□□□□ 0.33
Upk1aQ9D132 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.13■□□□□ 0.33
Upk1aQ9D132 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk1aQ9D132 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Upk1aQ9D132 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk1aQ9D132 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.12■□□□□ 0.33
Upk1aQ9D132 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.12■□□□□ 0.33
Upk1aQ9D132 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk1aQ9D132 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.11■□□□□ 0.33
Upk1aQ9D132 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.11■□□□□ 0.33
Upk1aQ9D132 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.11■□□□□ 0.33
Upk1aQ9D132 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.11■□□□□ 0.33
Upk1aQ9D132 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms