Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mms19Q9D071 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mms19Q9D071 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mms19Q9D071 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mms19Q9D071 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.32■□□□□ 0.68
Mms19Q9D071 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mms19Q9D071 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mms19Q9D071 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Mms19Q9D071 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mms19Q9D071 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mms19Q9D071 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.31■□□□□ 0.68
Mms19Q9D071 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.31■□□□□ 0.68
Mms19Q9D071 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Mms19Q9D071 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mms19Q9D071 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Mms19Q9D071 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.31■□□□□ 0.68
Mms19Q9D071 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mms19Q9D071 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mms19Q9D071 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mms19Q9D071 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mms19Q9D071 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Mms19Q9D071 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mms19Q9D071 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.3■□□□□ 0.68
Mms19Q9D071 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mms19Q9D071 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.3■□□□□ 0.68
Mms19Q9D071 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mms19Q9D071 Trmt13-210ENSMUST00000198454 880 ntBASIC19.3■□□□□ 0.68
Mms19Q9D071 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.3■□□□□ 0.68
Mms19Q9D071 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.3■□□□□ 0.68
Mms19Q9D071 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mms19Q9D071 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mms19Q9D071 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mms19Q9D071 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mms19Q9D071 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mms19Q9D071 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Mms19Q9D071 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.29■□□□□ 0.68
Mms19Q9D071 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.29■□□□□ 0.68
Mms19Q9D071 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.29■□□□□ 0.68
Mms19Q9D071 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mms19Q9D071 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Mms19Q9D071 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mms19Q9D071 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mms19Q9D071 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mms19Q9D071 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.29■□□□□ 0.68
Mms19Q9D071 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mms19Q9D071 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mms19Q9D071 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mms19Q9D071 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mms19Q9D071 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mms19Q9D071 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mms19Q9D071 Gm2399-201ENSMUST00000104944 225 ntBASIC19.28■□□□□ 0.68
Mms19Q9D071 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mms19Q9D071 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Mms19Q9D071 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mms19Q9D071 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.28■□□□□ 0.68
Mms19Q9D071 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mms19Q9D071 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mms19Q9D071 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mms19Q9D071 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.27■□□□□ 0.68
Mms19Q9D071 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mms19Q9D071 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Mms19Q9D071 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Mms19Q9D071 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mms19Q9D071 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mms19Q9D071 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.27■□□□□ 0.68
Mms19Q9D071 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.27■□□□□ 0.68
Mms19Q9D071 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.27■□□□□ 0.68
Mms19Q9D071 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.27■□□□□ 0.68
Mms19Q9D071 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.27■□□□□ 0.68
Mms19Q9D071 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mms19Q9D071 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mms19Q9D071 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mms19Q9D071 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mms19Q9D071 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mms19Q9D071 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mms19Q9D071 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.26■□□□□ 0.67
Mms19Q9D071 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mms19Q9D071 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Mms19Q9D071 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mms19Q9D071 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mms19Q9D071 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.26■□□□□ 0.67
Mms19Q9D071 Gm27275-201ENSMUST00000184318 272 ntBASIC19.26■□□□□ 0.67
Mms19Q9D071 Gm8520-201ENSMUST00000186517 868 ntBASIC19.26■□□□□ 0.67
Mms19Q9D071 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.26■□□□□ 0.67
Mms19Q9D071 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mms19Q9D071 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Mms19Q9D071 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Mms19Q9D071 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mms19Q9D071 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mms19Q9D071 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mms19Q9D071 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mms19Q9D071 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mms19Q9D071 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Mms19Q9D071 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mms19Q9D071 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mms19Q9D071 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mms19Q9D071 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Mms19Q9D071 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mms19Q9D071 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mms19Q9D071 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms