Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.77■□□□□ 0.27
Q9CR55 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q9CR55 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q9CR55 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Q9CR55 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q9CR55 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q9CR55 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q9CR55 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.76■□□□□ 0.27
Q9CR55 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.76■□□□□ 0.27
Q9CR55 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q9CR55 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Q9CR55 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q9CR55 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Q9CR55 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.76■□□□□ 0.27
Q9CR55 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q9CR55 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q9CR55 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q9CR55 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q9CR55 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Q9CR55 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q9CR55 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q9CR55 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q9CR55 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Q9CR55 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q9CR55 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Q9CR55 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q9CR55 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.75■□□□□ 0.27
Q9CR55 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q9CR55 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q9CR55 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q9CR55 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Q9CR55 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q9CR55 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.74■□□□□ 0.27
Q9CR55 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Q9CR55 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.74■□□□□ 0.27
Q9CR55 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Q9CR55 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Q9CR55 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Q9CR55 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.74■□□□□ 0.27
Q9CR55 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Q9CR55 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q9CR55 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q9CR55 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Q9CR55 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q9CR55 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q9CR55 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.73■□□□□ 0.27
Q9CR55 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Q9CR55 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Q9CR55 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q9CR55 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.73■□□□□ 0.27
Q9CR55 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q9CR55 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q9CR55 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q9CR55 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q9CR55 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q9CR55 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q9CR55 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q9CR55 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q9CR55 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.72■□□□□ 0.27
Q9CR55 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Q9CR55 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q9CR55 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Q9CR55 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q9CR55 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.71■□□□□ 0.27
Q9CR55 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Q9CR55 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Q9CR55 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q9CR55 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q9CR55 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q9CR55 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Q9CR55 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.71■□□□□ 0.27
Q9CR55 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q9CR55 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q9CR55 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q9CR55 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Q9CR55 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms