Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Rarb-207ENSMUST00000225921 2756 ntBASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Gm2399-201ENSMUST00000104944 225 ntBASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Gm20049-201ENSMUST00000219950 730 ntBASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg3Q9CQV4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Gm10812-201ENSMUST00000099864 546 ntBASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Retreg3Q9CQV4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retreg3Q9CQV4 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.14■□□□□ 0.5
Retreg3Q9CQV4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 AC153937.1-201ENSMUST00000218734 412 ntBASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retreg3Q9CQV4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.13■□□□□ 0.49
Retreg3Q9CQV4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retreg3Q9CQV4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms