Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Gm42642-201ENSMUST00000200683 355 ntBASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb1Q9CQ70 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1Q9CQ70 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1Q9CQ70 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
H2afb1Q9CQ70 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1Q9CQ70 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1Q9CQ70 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1Q9CQ70 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1Q9CQ70 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1Q9CQ70 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb1Q9CQ70 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
H2afb1Q9CQ70 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afb1Q9CQ70 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Gm5874-201ENSMUST00000096101 508 ntBASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb1Q9CQ70 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 156.7 ms