Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf2ird2Q99NI3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Gm5643-201ENSMUST00000117081 966 ntBASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Gm13158-201ENSMUST00000122007 736 ntBASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Zfp783-201ENSMUST00000095946 670 ntBASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf2ird2Q99NI3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf2ird2Q99NI3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf2ird2Q99NI3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf2ird2Q99NI3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf2ird2Q99NI3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf2ird2Q99NI3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Gtf2ird2Q99NI3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf2ird2Q99NI3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf2ird2Q99NI3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf2ird2Q99NI3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gtf2ird2Q99NI3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf2ird2Q99NI3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.52■□□□□ 0.56
Gtf2ird2Q99NI3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf2ird2Q99NI3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf2ird2Q99NI3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf2ird2Q99NI3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.52■□□□□ 0.56
Gtf2ird2Q99NI3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.52■□□□□ 0.56
Gtf2ird2Q99NI3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf2ird2Q99NI3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf2ird2Q99NI3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf2ird2Q99NI3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf2ird2Q99NI3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Gtf2ird2Q99NI3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gtf2ird2Q99NI3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.52■□□□□ 0.55
Gtf2ird2Q99NI3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gtf2ird2Q99NI3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.52■□□□□ 0.55
Gtf2ird2Q99NI3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gtf2ird2Q99NI3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gtf2ird2Q99NI3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Gm38285-201ENSMUST00000192928 922 ntBASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf2ird2Q99NI3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf2ird2Q99NI3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf2ird2Q99NI3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf2ird2Q99NI3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf2ird2Q99NI3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf2ird2Q99NI3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms