Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Gm44549-201ENSMUST00000208351 577 ntBASIC18.4■□□□□ 0.54
Trem2Q99NH8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trem2Q99NH8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trem2Q99NH8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trem2Q99NH8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trem2Q99NH8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trem2Q99NH8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Gm2399-201ENSMUST00000104944 225 ntBASIC18.39■□□□□ 0.53
Trem2Q99NH8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Trem2Q99NH8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.38■□□□□ 0.53
Trem2Q99NH8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.38■□□□□ 0.53
Trem2Q99NH8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trem2Q99NH8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.37■□□□□ 0.53
Trem2Q99NH8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trem2Q99NH8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trem2Q99NH8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.36■□□□□ 0.53
Trem2Q99NH8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trem2Q99NH8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trem2Q99NH8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trem2Q99NH8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trem2Q99NH8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.36■□□□□ 0.53
Trem2Q99NH8 Zfp783-201ENSMUST00000095946 670 ntBASIC18.36■□□□□ 0.53
Trem2Q99NH8 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.36■□□□□ 0.53
Trem2Q99NH8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trem2Q99NH8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trem2Q99NH8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trem2Q99NH8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trem2Q99NH8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trem2Q99NH8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.35■□□□□ 0.53
Trem2Q99NH8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trem2Q99NH8 Gm12933-201ENSMUST00000120203 872 ntBASIC18.35■□□□□ 0.53
Trem2Q99NH8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.35■□□□□ 0.53
Trem2Q99NH8 Mir5133-201ENSMUST00000174955 77 ntBASIC18.35■□□□□ 0.53
Trem2Q99NH8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.35■□□□□ 0.53
Trem2Q99NH8 Rab3c-203ENSMUST00000224180 967 ntBASIC18.35■□□□□ 0.53
Trem2Q99NH8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trem2Q99NH8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trem2Q99NH8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Trem2Q99NH8 Idnk-204ENSMUST00000226010 1898 ntBASIC18.35■□□□□ 0.53
Trem2Q99NH8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trem2Q99NH8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trem2Q99NH8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trem2Q99NH8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.33■□□□□ 0.52
Trem2Q99NH8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms