Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scrt1Q99M85 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scrt1Q99M85 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.81■□□□□ 0.12
Scrt1Q99M85 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.81■□□□□ 0.12
Scrt1Q99M85 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scrt1Q99M85 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scrt1Q99M85 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scrt1Q99M85 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scrt1Q99M85 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scrt1Q99M85 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scrt1Q99M85 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Scrt1Q99M85 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Scrt1Q99M85 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scrt1Q99M85 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.8■□□□□ 0.12
Scrt1Q99M85 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scrt1Q99M85 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Gm7367-201ENSMUST00000057611 492 ntBASIC15.79■□□□□ 0.12
Scrt1Q99M85 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.79■□□□□ 0.12
Scrt1Q99M85 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scrt1Q99M85 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Scrt1Q99M85 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.78■□□□□ 0.12
Scrt1Q99M85 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.78■□□□□ 0.12
Scrt1Q99M85 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scrt1Q99M85 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Scrt1Q99M85 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scrt1Q99M85 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Scrt1Q99M85 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Scrt1Q99M85 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scrt1Q99M85 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scrt1Q99M85 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scrt1Q99M85 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.77■□□□□ 0.12
Scrt1Q99M85 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scrt1Q99M85 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scrt1Q99M85 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scrt1Q99M85 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scrt1Q99M85 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scrt1Q99M85 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.77■□□□□ 0.11
Scrt1Q99M85 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms