Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd2Q99JR8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.29■□□□□ 0.52
Smarcd2Q99JR8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.29■□□□□ 0.52
Smarcd2Q99JR8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd2Q99JR8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd2Q99JR8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd2Q99JR8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Smarcd2Q99JR8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd2Q99JR8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smarcd2Q99JR8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd2Q99JR8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd2Q99JR8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 Gm18959-201ENSMUST00000208954 655 ntBASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd2Q99JR8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Gm12085-201ENSMUST00000119263 940 ntBASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Gm27463-201ENSMUST00000183569 57 ntBASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Gm10517-202ENSMUST00000192970 758 ntBASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd2Q99JR8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Smarcd2Q99JR8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcd2Q99JR8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcd2Q99JR8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Gm21362-201ENSMUST00000194272 928 ntBASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd2Q99JR8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd2Q99JR8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd2Q99JR8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd2Q99JR8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd2Q99JR8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd2Q99JR8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd2Q99JR8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd2Q99JR8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Smarcd2Q99JR8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd2Q99JR8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd2Q99JR8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd2Q99JR8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd2Q99JR8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd2Q99JR8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.23■□□□□ 0.51
Smarcd2Q99JR8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcd2Q99JR8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smarcd2Q99JR8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.23■□□□□ 0.51
Smarcd2Q99JR8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcd2Q99JR8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcd2Q99JR8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcd2Q99JR8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcd2Q99JR8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcd2Q99JR8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcd2Q99JR8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarcd2Q99JR8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms