Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col20a1Q923P0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Col20a1Q923P0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col20a1Q923P0 Golph3-205ENSMUST00000228671 2842 ntBASIC21.37■■□□□ 1.01
Col20a1Q923P0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col20a1Q923P0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.37■■□□□ 1.01
Col20a1Q923P0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col20a1Q923P0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col20a1Q923P0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.36■■□□□ 1.01
Col20a1Q923P0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col20a1Q923P0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col20a1Q923P0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col20a1Q923P0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Col20a1Q923P0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col20a1Q923P0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col20a1Q923P0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.36■■□□□ 1.01
Col20a1Q923P0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col20a1Q923P0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col20a1Q923P0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Col20a1Q923P0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.35■■□□□ 1.01
Col20a1Q923P0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col20a1Q923P0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.35■■□□□ 1.01
Col20a1Q923P0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col20a1Q923P0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.35■■□□□ 1.01
Col20a1Q923P0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col20a1Q923P0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col20a1Q923P0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col20a1Q923P0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.34■■□□□ 1.01
Col20a1Q923P0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col20a1Q923P0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col20a1Q923P0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col20a1Q923P0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col20a1Q923P0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Col20a1Q923P0 Gm15565-201ENSMUST00000118890 427 ntBASIC21.33■■□□□ 1.01
Col20a1Q923P0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
Col20a1Q923P0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.33■■□□□ 1.01
Col20a1Q923P0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col20a1Q923P0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col20a1Q923P0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Col20a1Q923P0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.33■■□□□ 1.01
Col20a1Q923P0 Gm21814-202ENSMUST00000203277 873 ntBASIC21.33■■□□□ 1.01
Col20a1Q923P0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col20a1Q923P0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col20a1Q923P0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col20a1Q923P0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col20a1Q923P0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col20a1Q923P0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Col20a1Q923P0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Col20a1Q923P0 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.33■■□□□ 1
Col20a1Q923P0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.33■■□□□ 1
Col20a1Q923P0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
Col20a1Q923P0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col20a1Q923P0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.32■■□□□ 1
Col20a1Q923P0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.32■■□□□ 1
Col20a1Q923P0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col20a1Q923P0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Col20a1Q923P0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col20a1Q923P0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Col20a1Q923P0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col20a1Q923P0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col20a1Q923P0 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.32■■□□□ 1
Col20a1Q923P0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col20a1Q923P0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col20a1Q923P0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col20a1Q923P0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Col20a1Q923P0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.31■■□□□ 1
Col20a1Q923P0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col20a1Q923P0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.31■■□□□ 1
Col20a1Q923P0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Col20a1Q923P0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.31■■□□□ 1
Col20a1Q923P0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col20a1Q923P0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col20a1Q923P0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.31■■□□□ 1
Col20a1Q923P0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col20a1Q923P0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col20a1Q923P0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col20a1Q923P0 Gm11643-201ENSMUST00000119578 864 ntBASIC21.3■■□□□ 1
Col20a1Q923P0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Col20a1Q923P0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col20a1Q923P0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.3■■□□□ 1
Col20a1Q923P0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.3■■□□□ 1
Col20a1Q923P0 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.3■■□□□ 1
Col20a1Q923P0 Gm5417-201ENSMUST00000079706 384 ntBASIC21.3■■□□□ 1
Col20a1Q923P0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col20a1Q923P0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col20a1Q923P0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms