Protein–RNA interactions for Protein: Q922Y2

Trim59, Tripartite motif-containing protein 59, mousemouse

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim59Q922Y2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim59Q922Y2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim59Q922Y2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim59Q922Y2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim59Q922Y2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim59Q922Y2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Trim59Q922Y2 Gm2399-201ENSMUST00000104944 225 ntBASIC20.71■□□□□ 0.91
Trim59Q922Y2 Gm12933-201ENSMUST00000120203 872 ntBASIC20.71■□□□□ 0.91
Trim59Q922Y2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Trim59Q922Y2 Rab3c-203ENSMUST00000224180 967 ntBASIC20.71■□□□□ 0.91
Trim59Q922Y2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.71■□□□□ 0.91
Trim59Q922Y2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim59Q922Y2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim59Q922Y2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim59Q922Y2 Idnk-204ENSMUST00000226010 1898 ntBASIC20.71■□□□□ 0.91
Trim59Q922Y2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim59Q922Y2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.7■□□□□ 0.91
Trim59Q922Y2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim59Q922Y2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim59Q922Y2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.7■□□□□ 0.9
Trim59Q922Y2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim59Q922Y2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim59Q922Y2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trim59Q922Y2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim59Q922Y2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim59Q922Y2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim59Q922Y2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim59Q922Y2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim59Q922Y2 Zfp783-201ENSMUST00000095946 670 ntBASIC20.69■□□□□ 0.9
Trim59Q922Y2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim59Q922Y2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim59Q922Y2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim59Q922Y2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim59Q922Y2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim59Q922Y2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim59Q922Y2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim59Q922Y2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim59Q922Y2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim59Q922Y2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim59Q922Y2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Trim59Q922Y2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim59Q922Y2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim59Q922Y2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim59Q922Y2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim59Q922Y2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim59Q922Y2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim59Q922Y2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim59Q922Y2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.67■□□□□ 0.9
Trim59Q922Y2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Trim59Q922Y2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Gm15039-201ENSMUST00000118914 875 ntBASIC20.66■□□□□ 0.9
Trim59Q922Y2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim59Q922Y2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
Trim59Q922Y2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim59Q922Y2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim59Q922Y2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim59Q922Y2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim59Q922Y2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim59Q922Y2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim59Q922Y2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim59Q922Y2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim59Q922Y2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim59Q922Y2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim59Q922Y2 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.65■□□□□ 0.9
Trim59Q922Y2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim59Q922Y2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Trim59Q922Y2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim59Q922Y2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim59Q922Y2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim59Q922Y2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim59Q922Y2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms